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If an employee has been working here for less than 6 months at the time I am setting up my payroll, do I just leave the 'Current sick leave due' field blank and assume that the payroll system will automatically allocate 5 days when they have been here 6 months?

Yes...  BUT: You must make sure you have entered a quantity of 5 in the “Annual Entitlement” field in order for this to work.  This means that upon their annual sick leave anniversary a quantity of 5 days will be added each time.   The first anniversary occurs when they have been employed for 6 months, then every 12 months after that.

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